buld(nix): Misc Nix-related improvements

- Nixpkgs 23.11 is deprecated, use 24.05 instead
- update flake.lock
- add glibc as a build dependency
- add doxygen and graphviz as development dependencies for `make format`

default.nix

@@ -33,12 +33,14 @@ pkgs.stdenv.mkDerivation rec {
   };
 
   nativeBuildInputs = with pkgs; [
+    glibc
     gnumake
     openssl
     which
   ];
 
   buildInputs = with pkgs; [
+    glibc
     openssl
     which
   ];